Browse of TCMCG075C16869 protein

CDS

Accession Number	TCMCG075C16869
gbkey	CDS
Protein Id	XP_017977279.1
Location	join(29399078..29399246,29399438..29399646,29400204..29400344,29400512..29400685,29402481..29402580,29404121..29404239,29404337..29404459,29404576..29404647,29405326..29405418,29406007..29406120,29406206..29406328,29406471..29406656,29406752..29406826,29407653..29407789,29409140..29409274,29409661..29409806,29409895..29409960,29411036..29411142,29411296..29411376,29411481..29411555,29411664..29411765,29412540..29412708,29412799..29412944,29413125..29413208,29413323..29413423,29413701..29413854,29413957..29414031,29414160..29414295,29415770..29416421,29417236..29417296,29417843..29417988,29418076..29418259,29418446..29418544,29418807..29419171,29419275..29419451,29420151..29420247,29420380..29420535,29420619..29420849,29420944..29421027,29421148..29421255)
Gene	LOC18599194
GeneID	18599194
Organism	Theobroma cacao

Protein

Length	1923aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA341501
db_source	XM_018121790.1
Definition	PREDICTED: rRNA biogenesis protein RRP5 isoform X3 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCGCCTACGAAGAAATCTCAGAAGAAAAAATCCAAGGAAAGGAAACCAAAGTTCAATAAAGCGTCCAAGAAACAGTATAAAGCGAGGAAGGATTCAAACGACGCCGTTAAGTCTGAGGCAGTCGCTTTGCAGCTCGAAGATGATGTCCCTGACTTCCCTAGAGGCGGGGGAAGTTCTTTAAGCAAACGAGAACGTGATGAAATCCGAGCTGAAGTAGATGCGGAATTTGAGGGAGAGGAGCGGTCATTAAAGAAGAATAAGAGGAAGACGTTGCAGAAGAAGAGCCAGGTCATGCTGGATGACTTGGGTTCACTTTTTGGTGATGGTATTACCGGCAAGTTACCTAGATATGCCAACAAAATAACTTTGAAGAATATTTCTCCTGGAATGAAGCTCTGGGGAGTTGTTGCCGAGGTAAATGAGAAGGACCTTGTAATTAGTCTTCCTGGGGGCTTACGTGGTTTAGTTCGTGCTGCTGATGCACTTGATTCTGTTCTCAGTAATGAAGTTGAGAATAATGAAGGAAATTTCCTCACAAATATATTCTGCACCGGGCAGCTGGTTTCTTGCATAGTGCTGCAGTTGGATGATGATAAGAAGGAGACTGGCAAAAGAAAAATATGGCTTTCCTTGCGTCTCTCTTTATTGCACAAAAGCTTCACCTTGGATGCTGTTCAAGAAGGGATGGTTCTCACTGCATATGTGAAAAGCATTGAAGATCATGGTTACATTCTTCACTTTGGATTGTCTTCATTCATGGGGTTTTTACCAAAAGATGACGAAGGTGAAAGCAGGGACATCAAAGTGAGGACTGGGCAATTCTTACAAGGGGTTGTTAGGCGCATTGATAAAACCCGCAAAGTTGTTTATTTGAGTTCTAATCCAGATACTGTGTCTAAATGTGTAACCAAAGATCTTAAGGGCATTTCAATTGATCTTCTTATTCCAGGCATGTTGGTTAATACTTCTGTGCGGTCAATCCTTGAGAATGGGGTCATGTTATCATTCCTCACATACTTTACTGGAACAGTTGATATGTTTCATTTACAAAATCAATTCCCAACTAAGGACTGGAAGGATGATTACAATCAAAATAAGAAGATTAATGCTCGGATACTATTTATTGATCCCTCAACTAGAGCAGTGGGCTTGACCCTGAATCCTCATCTTGTTCACAACAAAGCTCCTCCTTCGCACGTTAACATTGGAGAGATTTATGACCAGTCAAAAGTGATCAGGGTTGATAGAGGCTTAGGTCTTCTGCTTGACATCCCATCTAAACCAGTGTCAACTCCAGCCTATGTTTATATATCTGATGTGGCTGAAGAGGAAGTCCGGAAGCTAGAAAAGAAGTTCAAGGAAGGCAGCCAAGTTCGTGTTCGAATTCATGGATTCAGGCACTTGGAAGGGCTTGCCACTGGTATTTTAAAGGCCAGTGCATTTGAAGGGCAAGTGTTCACTCACTCAGATGTGAAGCCTGGGATGGTGATAAGAGCTAAAGTCATTGCACTTGACAGCTTCAGTGCCATTGTACAATTTCCCGGTGGTGTAAAGGCACTGTGTCCCATTCGTCATATGTCTGAATTTGAAATTGCAAAACCTGGAAAAAAGTTTAAGGTTGGAGCTGAATTGGTCTTCCGGGTGCTAGGTTGCAAGTCGAAGAGAATAACTGTTACGCACAAGAAAACTCTAGTGAAATCAAAACTTGGTATTATTAGTTCTTATGCTGATGCAACTGAGGGATTTATAACACATGGATGGATAACTAAGATTGAAAAGCATGGATGCTTCGTCCGGTTTTACAATGGAGTCCAAGGATTTGCACCCAGATCTGAACTTGGCTTAGGACCAGGATATGATCCAAGTTCAATGTATCATGTGGGACAAGTTATTAAATGCAGAGTTACCAGTTCTAACCCAGCTTCACGGCGTATCAATCTTAGTTTCCAGATGAAGCCTGTGAGGGTTTCTGAAGATGATTTGGTCAAGTTGGGTAGTATTGTTTCAGGACTAATTGACAGGCTTACCCCTTCTGCAGTAGTTATACAAGTTAACTCGAAAGCTCACTTGAAGGGTACAATTTCTAATGAACATTTGGCAGATAATCATGAGTCTGCTGCCTTGTTGAAGTCAGTCTTGAAGCCAGGATATAAGTTTGATCAACTGCTGGTTCTAGATATTGAGGGCAACAACATCTTACTCTCTGCTAAATACTCTCTCACAAGTTTGGCTGAACAACTGCCATCTGATATCAGTCAGATCCACCCTAACTCAGTGGTCCATGGTTATGTTTGTAATTTGATTGAAACTGGCTGCTTTGTCCGCTTTCTTGGCCGTTTGACTGGTTTCTCACCCCGAAGCAAGTCAACGGATGACTATAAAGCTGATCTATCAGGAGCCTTTTATGTCGGTCAATCTGTTCGCAGTAATATACTCGATGTAAATAGTGAAACAGCAAGAATAACACTTTCTTTGAAGCAGTCATCATGTTCTTCAACCGATGCTAGCTTTATTCAAGAATTCTTTCTTTTGGAAGAGAAGATTGCTAAGCTGCAATCATCGGACTCTGATGGATCTGAGTTGAAGTGGGTTGAAGGATTTAATGTTGGCAGTGTCATTGAGGGAAAAATTGGAGAGGCAAAGGATATTGGAGTGGTTGTTAGCTTTGACAAATACAATGATGTTTTAGGCTTTGTCACACATCATCAATGTGGACTTACTTTGGAAACAGGATCCATTGTTCAAGCTGCAGTTCTTGATGTTGCCAAGGCAGAACGCCTTGTTGATTTATCCTTAAAACCCGAGTTTGTTGATAAATCTCAAGAGGAAAGTTCTAAAGGCCAAATTCAAAAGAAGAAGCGCAAAAGAGAAGCTTCCAAGGACTTGGAGGTGCACCAGACAGTAAATGCAGTCGTGGAGATTGTGAAAGAGCATTACTTGGTTCTTGCAATTCCAGAGTATAACTATGCCATAGGGTATGCATCAAAAGCAGATTACAATACACAGAAGTTTCCTCAGAAACAATTTGTGAATGGGCAGAGGGTTATTGCCACTGTTATGGCTCTTCCAAGGCCCACAACTTCAGGAAGGTTGCTTTTACTTCTTAATTCTATTAGTGAGGTTACTGAGACATCCAGCTCGAAAAGGGCCAAAAAGAAGTCTAGCTATAGTGTGGGATCCTTGGTTTCAGCAGAGGTTACTGAAATTATGCCACTTGAATTGAGATTGAAATTTGGCATTGGTTTCCGTGGACGAGTTCATATAACAGAGGTGAATGATGATAATGTTCTTGAAAATCCTTTTGCGAACTTCAAAATTGGGCAGACAATCACTGCAAGGGTTGTGGGAAAGGCTAATCAGAAAGGATATCTTTGGGATTTGTCTATCAAACCTACAATGCTTGCTGGTACTGGTGAAACAGGTGTCAATTCTACAAATGATGAATGCAATTTTTCAGCTGGGCAACTTGTCACTGGTTATGTCTACAAAATGGACACTGAATGGGCCTGGTTAACCATATCTCGTCATGTGAAAGCTCAGCTATATATTCTTGATAGTGCACGTGAACCTAATGAACTTCAGCAGTTCCAGGAACGCTTCAAAGTTGGGAAGGCTGTTTCTGGTCATGTTTTAAATGTTAACAAGGACAAAAAGCTGTTACGATTGGTCCGACATCCTCTAGGTGCTCTTTCTATTCGAAATGTTCATGGTGAAGATAAAAGGACAGGTGAATCAGATAATAACATTTCCGGTGAGAGTGTTACAACTCATATTCATGAAGGAGATATCTTAGGTGGTAGAATTTCGAAAATACTTCCTGGTGTAGGTGGATTGCTTGTACAAATAGGTCCTCACATATTTGGTAGGGTTCATTTTACTGAACTGAAGGACACATGGGAATCTGACCCATTATCTGGATATTATGAGGGGCAATTTGTTAAGTGCAAAGTCCTAGAAATCAGCCACTCAGTCAAGGGAACTATTCACATTGATTTATCATTACGTATATCTTTGGATGGCATGCTTCCCAACAATCCTTCAGAACTCGGCAGTGATGAGGACTCTACGAGCAAGCGTGTGGAAAAAATTGAGGATCTTTATCCCAATATGGCCATACAGGGTTATGTTAAAAATACGATCCCAAAAGGATGCTTTATTCTGCTTTCAAGGAAACTAGATGCAAAAATTCTTCTATCAAATTTGTCTGATGGCTATATTGATGACCCAAAAAAGGAATTCCCCATTGGAAAGCTTGTAGCTGGAAGGGTGTTAGCAGTCGAACCTTTGTCAAAACGAGTTGAAGTTACCTTAAAAAAATCAAATACTAATGGCACCTCAAAATCTGAAATTAATGATTTTAGTAGCCTGCATGTTGGAGATATAGTTTCAGGCAGGATCAGGCGTGTGGAGTCGTATGGTTTGTTTGTAACACTTGACCACACAAACATGGTTGGACTGTGCCATGTCTCAGAGCTTTCAGATGATCACGTTGATAACATCCAAACTAAATACAGAGCTGGGGAAAAGGTTACAGCAAAGATATTAAAGTTGGATGAAGAAAGACACCGGATTTCCCTTGGTATGAAAAATTCATATCTTACTGATGATATTGATATCCAAATACCCTCAAATGAAGAGTCTGATGAAGACGTTGAAGAGACAGATGACACAAGATCAAGAATGTTGACAGACAGCACTCTTGGGATGGCTATTGAGTATGAAAATGGAGCAAGCTCTATTCTTGCTCAAGCAGAATCAAGAGCTTCGATTCCTCCACTTGAGGTCACTCTTGATGACATTGAGCACTCTGATATGGATATTTTAGTTAGTCAAAATCAAGCAAATAGTAATGAGGCAGTCACCGGTGATGAGAAGAACAAGAGACGAGCAAAAAAGAAAGCAAAGGAAGATAGGGAGCGGGAAATTAGAGCTGCTGAGGAAAGACAATTGGAGATGGATGTACCAAGAACTGCTGATGAATTTGAGAAACTTGTTAGAAACTCTCCTAATAGCAGTTTTGTCTGGATAAAATACATGGCTTTCATGCTCAATTCAGCTGATATTGAGAAAGCCCGTGCTATTGCTGAAAGGGCTTTGAGGACAATAAACATTCGAGAAGAAAATGAGAAGCTAAATATCTGGATGGCTTACTTTAATCTGGAGAATCAATATGGGAATCCTCCAGAGGAAGCTGTGCAAAAAATATTTCAACGGGCATTGCAGTATTGTGATCCCAAAAAGGTACATTTAGCACTTTTGGGCATGTATGAGAGGACAGAGCAACATAAGTTGGCCGATGAGCTACTTGACAAAATGACCAGGAAGTTTAAGCACTCGTGCAAGGTTTGGTTGAGGCGGGTGCAGATGTTGTTGATGCAACAGCAGGATGGGGTTCAGTCTGTTGTAAACCGTGCTTTATTATGTCTTCCACGCCATAAGCACATCAAGTTCATTTCACAGACAGCTATACTTGAGTTCAAATCTGGGGTTCCTGATAGAGGGAGATCTATGTTTGAGGGAATTTTACGGGAGTACCCAAAGAGGACAGATTTGTGGAGCATTTACCTTGATCAAGAGATTCGACTTGGAGATGAAGATGTGATCCGTGCTCTGTTTGAGAGGGCAATTAGCTTGAGCTTACCACCCAAAAAGATGAAATTCTTGTTCAAGAAGTATCTTGATTATGAGAAATCTCTGGGTGACGAGGAAAGAATTAAATCCGTTAAACAGAAGGCAATGGATTATGTCGAAAGTACACTAACTTGA

Protein:   MAAPTKKSQKKKSKERKPKFNKASKKQYKARKDSNDAVKSEAVALQLEDDVPDFPRGGGSSLSKRERDEIRAEVDAEFEGEERSLKKNKRKTLQKKSQVMLDDLGSLFGDGITGKLPRYANKITLKNISPGMKLWGVVAEVNEKDLVISLPGGLRGLVRAADALDSVLSNEVENNEGNFLTNIFCTGQLVSCIVLQLDDDKKETGKRKIWLSLRLSLLHKSFTLDAVQEGMVLTAYVKSIEDHGYILHFGLSSFMGFLPKDDEGESRDIKVRTGQFLQGVVRRIDKTRKVVYLSSNPDTVSKCVTKDLKGISIDLLIPGMLVNTSVRSILENGVMLSFLTYFTGTVDMFHLQNQFPTKDWKDDYNQNKKINARILFIDPSTRAVGLTLNPHLVHNKAPPSHVNIGEIYDQSKVIRVDRGLGLLLDIPSKPVSTPAYVYISDVAEEEVRKLEKKFKEGSQVRVRIHGFRHLEGLATGILKASAFEGQVFTHSDVKPGMVIRAKVIALDSFSAIVQFPGGVKALCPIRHMSEFEIAKPGKKFKVGAELVFRVLGCKSKRITVTHKKTLVKSKLGIISSYADATEGFITHGWITKIEKHGCFVRFYNGVQGFAPRSELGLGPGYDPSSMYHVGQVIKCRVTSSNPASRRINLSFQMKPVRVSEDDLVKLGSIVSGLIDRLTPSAVVIQVNSKAHLKGTISNEHLADNHESAALLKSVLKPGYKFDQLLVLDIEGNNILLSAKYSLTSLAEQLPSDISQIHPNSVVHGYVCNLIETGCFVRFLGRLTGFSPRSKSTDDYKADLSGAFYVGQSVRSNILDVNSETARITLSLKQSSCSSTDASFIQEFFLLEEKIAKLQSSDSDGSELKWVEGFNVGSVIEGKIGEAKDIGVVVSFDKYNDVLGFVTHHQCGLTLETGSIVQAAVLDVAKAERLVDLSLKPEFVDKSQEESSKGQIQKKKRKREASKDLEVHQTVNAVVEIVKEHYLVLAIPEYNYAIGYASKADYNTQKFPQKQFVNGQRVIATVMALPRPTTSGRLLLLLNSISEVTETSSSKRAKKKSSYSVGSLVSAEVTEIMPLELRLKFGIGFRGRVHITEVNDDNVLENPFANFKIGQTITARVVGKANQKGYLWDLSIKPTMLAGTGETGVNSTNDECNFSAGQLVTGYVYKMDTEWAWLTISRHVKAQLYILDSAREPNELQQFQERFKVGKAVSGHVLNVNKDKKLLRLVRHPLGALSIRNVHGEDKRTGESDNNISGESVTTHIHEGDILGGRISKILPGVGGLLVQIGPHIFGRVHFTELKDTWESDPLSGYYEGQFVKCKVLEISHSVKGTIHIDLSLRISLDGMLPNNPSELGSDEDSTSKRVEKIEDLYPNMAIQGYVKNTIPKGCFILLSRKLDAKILLSNLSDGYIDDPKKEFPIGKLVAGRVLAVEPLSKRVEVTLKKSNTNGTSKSEINDFSSLHVGDIVSGRIRRVESYGLFVTLDHTNMVGLCHVSELSDDHVDNIQTKYRAGEKVTAKILKLDEERHRISLGMKNSYLTDDIDIQIPSNEESDEDVEETDDTRSRMLTDSTLGMAIEYENGASSILAQAESRASIPPLEVTLDDIEHSDMDILVSQNQANSNEAVTGDEKNKRRAKKKAKEDREREIRAAEERQLEMDVPRTADEFEKLVRNSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREENEKLNIWMAYFNLENQYGNPPEEAVQKIFQRALQYCDPKKVHLALLGMYERTEQHKLADELLDKMTRKFKHSCKVWLRRVQMLLMQQQDGVQSVVNRALLCLPRHKHIKFISQTAILEFKSGVPDRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKYLDYEKSLGDEERIKSVKQKAMDYVESTLT